Publications

Publications by reversed chronological order.

2022

  1. PhylomeDB V5: an expanding repository for genome-wide catalogues of annotated gene phylogenies
    Diego Fuentes, Manuel Molina, Uciel Chorostecki, and 3 more authors
    Nucleic Acids Research 2022
  2. Secondary structure prediction of long noncoding RNA: review and experimental comparison of existing approaches
    LA Bugnon, Alejandro A Edera, S Prochetto, and 8 more authors
    Briefings in Bioinformatics 2022

2021

  1. Structural characterization of NORAD reveals a stabilizing role of spacers and two new repeat units
    Uciel Chorostecki, Ester Saus, and Toni Gabaldón
    Computational and structural biotechnology journal 2021
  2. Profiling of RNA structure at single-nucleotide resolution using nextPARS
    Uciel Chorostecki, Jesse R Willis, Ester Saus, and 1 more author
    2021

2020

  1. MetaPhOrs 2.0: integrative, phylogeny-based inference of orthology and paralogy across the tree of life
    Uciel Chorostecki, Manuel Molina, Leszek P Pryszcz, and 1 more author
    Nucleic acids research 2020
  2. Identification of key sequence features required for microRNA biogenesis in plants
    Arantxa ML Rojas, Salvador I Drusin, Uciel Chorostecki, and 8 more authors
    Nature communications 2020

2019

  1. Transcriptomic analyses reveal groups of co-expressed, syntenic lncRNAs in four species of the genus Caenorhabditis
    Cinta Pegueroles, Susana Iraola-Guzmán, Uciel Chorostecki, and 3 more authors
    RNA biology 2019

2018

  1. Spatial control of gene expression by miR319-regulated TCP transcription factors in leaf development
    Edgardo G Bresso, Uciel Chorostecki, Ramiro E Rodriguez, and 2 more authors
    Plant physiology 2018
  2. Efficiency and precision of microRNA biogenesis modes in plants
    Belén Moro, Uciel Chorostecki, Siwaret Arikit, and 5 more authors
    Nucleic acids research 2018

2017

  1. Evolutionary footprints reveal insights into plant microRNA biogenesis
    Uciel Chorostecki, Belen Moro, Arantxa ML Rojas, and 4 more authors
    The Plant Cell 2017

2014

  1. comTAR: a web tool for the prediction and characterization of conserved microRNA targets in plants
    Uciel Chorostecki, and Javier F Palatnik
    Bioinformatics 2014

2013

  1. Multiple RNA recognition patterns during microRNA biogenesis in plants
    Nicolás G Bologna, Arnaldo L Schapire, Jixian Zhai, and 4 more authors
    Genome research 2013

2012

  1. Identification of new microRNA-regulated genes by conserved targeting in plant species
    Uciel Chorostecki, Valeria A Crosa, Anabella F Lodeyro, and 5 more authors
    Nucleic Acids Research 2012

2010

  1. Identification of microRNA processing determinants by random mutagenesis of Arabidopsis MIR172a precursor
    Julieta L Mateos, Nicolás G Bologna, Uciel Chorostecki, and 1 more author
    Current Biology 2010